rfmm_161320.1

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Basic information about the TSS


TSS ID:rfmm_161320.1
Species:mouse
Chr:chr19
Start:6327755
End:6327796
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D1633885,EM10E0670618)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:849
    Nearest PromoterID:NM_010119.5
    Entrez ID:Ehd1
    Nearest Unigene:NM_010119
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.024390
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):3(CACTTTAAAAAC,-,0.00),5(CTTTAAAAACGG,+,0.00)