rfmm_163414.1

Basic information about the TSS

TSS ID:	rfmm_163414.1
Species:	mouse
Chr:	chr19

Start:	27988587
End:	27988621
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2609018,EM10E1075989)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF201724:20 MA437301:20
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000173161.2:21 NM_001166414.2:21 NM_011265.3:21 AK041120:21 ENSMUST00000174850.8:47 BC017598:47 ENSMUST00000046898.17:139 AK140928:139 ENSMUST00000172907.8:142 AK030008:142 ENSMUST00000174420.2:397 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-38
Nearest PromoterID:	NM_011265.3
Entrez ID:	Rfx3
Nearest Unigene:	XM_011247169
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.117647
GC%:	0.800000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):