rfmm_163640.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_163640.1
Species:mouse
Chr:chr19
Start:29500567
End:29500575
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2609651,EM10E1076263)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000180986.8:8
AK020826:8
GeneID:77779
HGNC/MGI_ID:MGI:1925029
UniProt_ID:
Nearer transcript ids and distances:
  • AK132712:133
Gene_name:RIKEN cDNA A930007I19 gene
Gene_symbol:A930007I19Rik
Gene_synonyms:
Gene_source:MGI:1925029



TATA-Box annotation


Distance to TSS:889
Nearest PromoterID:NM_001081319.1
Entrez ID:Ric1
Nearest Unigene:NM_001081319
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA A930007I19 gene
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.