rfmm_164806.1

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Basic information about the TSS


TSS ID:rfmm_164806.1
TSS ID(Version3):mm_153527.1
Species:mouse
Chr:chr19
Start:41790468
End:41790503
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1652369,EM10E0678724)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000026150.15:0
ENSMUST00000163265.9:0
ENSMUST00000177495.2:0
BC086680:0
AK164477:0
AK044841:0
AK016763:0
GeneID:71085
HGNC/MGI_ID:MGI:1918335
UniProt_ID:E9Q4T1 Q8BRH3
Nearer transcript ids and distances:
  • AK220317:9
  • NM_027667.3:-20
  • NM_001163495.1:-20
  • BC139195:-20
view more...
Gene_name:Rho GTPase activating protein 19
Gene_symbol:Arhgap19
Gene_synonyms:4933411B03Rik
Gene_source:MGI:1918335



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:XM_036161689.1
Entrez ID:Arhgap19
Nearest Unigene:XM_011247341
Nearest Refseq:
Nearest Ensembl:
Gene Name:Rho GTPase activating protein 19
Gene Alias:
Gene Type:
CpG%:0.085714
GC%:0.722222
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.