rfmm_165048.1

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Basic information about the TSS


TSS ID:rfmm_165048.1
TSS ID(Version3):mm_153642.1
Species:mouse
Chr:chr19
Start:44134864
End:44134886
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2615187,EM10E1078742)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000237630.2:0
ENSMUST00000079033.6:0
ENSMUST00000236380.2:0
BC065806:0
BC048500:0
AK010745:0
AK145313:0
GeneID:73689
HGNC/MGI_ID:MGI:1920939
UniProt_ID:A0A494BAG7 Q9CWG9
Nearer transcript ids and distances:
  • ENSMUST00000237867.2:26
Gene_name:biogenesis of lysosomal organelles complex-1, subunit 2
Gene_symbol:Bloc1s2
Gene_synonyms:2410089B13Rik BLOS2 Bloc1s2 Bloc1s2a
Gene_source:MGI:1920939



TATA-Box annotation


Distance to TSS:10
Nearest PromoterID:NM_028607.1
Entrez ID:Bloc1s2
Nearest Unigene:XM_011247369
Nearest Refseq:
Nearest Ensembl:
Gene Name:biogenesis of lysosomal organelles complex-1, subunit 2
Gene Alias:
Gene Type:
CpG%:0.045455
GC%:0.565217
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.