rfmm_165549.1

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Basic information about the TSS


TSS ID:rfmm_165549.1
Species:mouse
Chr:chr19
Start:46678342
End:46678382
Strand:+
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2616779,EM10E1079568)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000074912.8:0
AK046524:0
AK008215:0
AK007626:0
BC027506:0
GeneID:66439
HGNC/MGI_ID:MGI:1913689
UniProt_ID:Q9CRC6
Nearer transcript ids and distances:
    Gene_name:BLOC-1 related complex subunit 7
    Gene_symbol:Borcs7
    Gene_synonyms:2010012O05Rik
    Gene_source:MGI:1913689



    TATA-Box annotation


    Distance to TSS:17
    Nearest PromoterID:NM_025563.3
    Entrez ID:Borcs7
    Nearest Unigene:NM_025563
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:BLOC-1 related complex subunit 7
    Gene Alias:
    Gene Type:
    CpG%:0.150000
    GC%:0.658537
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.