rfmm_165976.1

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Basic information about the TSS


TSS ID:rfmm_165976.1
Species:mouse
Chr:chr19
Start:53892240
End:53892258
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2618928,EM10E1080447)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK009643:162
GeneID:75683
HGNC/MGI_ID:MGI:1922933
UniProt_ID:
Nearer transcript ids and distances:
  • D86344:-340
  • ENSMUST00000165617.3:-393
  • BC055739:-393
  • AK172654:-413
  • ENSMUST00000237060.2:-434
  • NM_001168492.1:-458
  • NM_001168491.1:-458
view more...
Gene_name:RIKEN cDNA 2310035P21 gene
Gene_symbol:2310035P21Rik
Gene_synonyms:
Gene_source:MGI:1922933



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:XM_036161460.1
Entrez ID:Pdcd4
Nearest Unigene:NM_011050
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 2310035P21 gene
Gene Alias:
Gene Type:
CpG%:0.111111
GC%:0.736842
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.