rfmm_166563.1

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Basic information about the TSS


TSS ID:rfmm_166563.1
Species:mouse
Chr:chr19
Start:60849829
End:60849900
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1664748,EM10E0684311)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000080806.10:0
ENSMUST00000124921.2:0
BC058211:0
AK148530:0
BC089535:0
GeneID:94281
HGNC/MGI_ID:MGI:2137680
UniProt_ID:D6RHK7 F8WI63
Nearer transcript ids and distances:
  • ENSMUST00000135808.8:-17
  • AF325263:27
view more...
Gene_name:sideroflexin 4
Gene_symbol:Sfxn4
Gene_synonyms:
Gene_source:MGI:2137680



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_053198.4
Entrez ID:Sfxn4
Nearest Unigene:NM_053198
Nearest Refseq:
Nearest Ensembl:
Gene Name:sideroflexin 4
Gene Alias:
Gene Type:
CpG%:0.056338
GC%:0.569444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.