rfmm_167310.1

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Basic information about the TSS


TSS ID:rfmm_167310.1
Species:mouse
Chr:chrX
Start:7473348
End:7473366
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000133637.8:0
AK044695:0
GeneID:54652
HGNC/MGI_ID:MGI:1859639
UniProt_ID:Q8C8Q4
Nearer transcript ids and distances:
  • ENSMUST00000115725.9:2
  • BC051413:2
  • AF192497:-5
  • NM_019582.2:-6
  • ENSMUST00000115726.9:-10
  • ENSMUST00000144522.8:-11
  • BC057653:-11
  • ENSMUST00000141634.8:17
  • BC043482:17
  • BC146312:19
  • AJ579852:19
  • BC156573:19
  • ENSMUST00000155090.8:-26
view more...
Gene_name:calcium channel, voltage-dependent, alpha 1F subunit
Gene_symbol:Cacna1f
Gene_synonyms:Cav1.4 Sfc17
Gene_source:MGI:1859639



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NM_019582.2
Entrez ID:Cacna1f
Nearest Unigene:XM_030251408
Nearest Refseq:
Nearest Ensembl:
Gene Name:calcium channel, voltage-dependent, alpha 1F subunit
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.578947
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.