rfmm_1863.1

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Basic information about the TSS


TSS ID:rfmm_1863.1
Species:mouse
Chr:chr1
Start:52987147
End:52987168
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:DNase-H3K4me3,CTCF-bound (EM10D1055919,EM10E0437412)
Category:DNase-H3K4me3

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001368281.1:8
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-18
    Nearest PromoterID:NM_001368281.1
    Entrez ID:1700019D03Rik
    Nearest Unigene:NM_001368281
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.545455
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):