rfmm_18640.1

Basic information about the TSS

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TSS ID: rfmm_18640.1 Species: mouse Chr: chr2		Start: 118943291 End: 118943363 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D1720369,EM10E0707153)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000110828.2:0 ENSMUST00000152327.8:0 AK045050:0 AK011242:0 AK148165:0 AK160282:0 AK151157:0 AK151177:0 BC027384:0 D13803:0 D13473:0 AK076468:0 GeneID: 19361 HGNC/MGI_ID: MGI:97890 UniProt_ID: D6RCK1 Nearer transcript ids and distances: ENSMUST00000028795.10:-3 ENSMUST00000140939.8:-17 view more...

Gene_name: RAD51 recombinase Gene_symbol: Rad51 Gene_synonyms: Rad51a Reca Gene_source: MGI:97890

TATA-Box annotation

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Distance to TSS:	32
Nearest PromoterID:	NR_156017.1
Entrez ID:	Rad51
Nearest Unigene:	NM_011234
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RAD51 recombinase
Gene Alias:
Gene Type:
CpG%:	0.166667
GC%:	0.671233
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.