rfmm_18659.1

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Basic information about the TSS


TSS ID:rfmm_18659.1
Species:mouse
Chr:chr2
Start:119067687
End:119067698
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2656144,EM10E1095573)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_016907.3:143
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000028783.14:145
  • AF099018:201
  • LF262870:-251
  • MA498447:-251
  • ENSMUST00000110816.8:260
  • BC053341:260
  • ENSMUST00000110817.3:336
  • BC005769:484
  • AK017342:489
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-149
Nearest PromoterID:NM_016907.3
Entrez ID:Spint1
Nearest Unigene:NM_016907
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.090909
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):