rfmm_1882.1

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Basic information about the TSS


TSS ID:rfmm_1882.1
Species:mouse
Chr:chr1
Start:53226756
End:53226794
Strand:-
Source datasetsFANTOM5|DRA000914
ProtocolCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000190748.2:0
AK006101:0
GeneID:69397
HGNC/MGI_ID:MGI:1916647
UniProt_ID:A0A087WPV9 Q9DA74
Nearer transcript ids and distances:
  • ENSMUST00000072235.10:-1
  • LF192656:-2
  • MA428233:-2
view more...
Gene_name:RIKEN cDNA 1700019A02 gene
Gene_symbol:1700019A02Rik
Gene_synonyms:
Gene_source:MGI:1916647



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001368200.1
Entrez ID:1700019A02Rik
Nearest Unigene:XR_865288
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700019A02 gene
Gene Alias:
Gene Type:
CpG%:0.052632
GC%:0.589744
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.