rfmm_18977.1

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Basic information about the TSS


TSS ID:rfmm_18977.1
TSS ID(Version3):mm_170674.1
mm_13977.1
Species:mouse
Chr:chr2
Start:121279827
End:121279910
Strand:+
Source datasetsDRA000914|GSE117655|PRJDB10397
ProtocolCAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000134412.2:0
ENSMUST00000110615.8:0
ENSMUST00000099475.12:0
ENSMUST00000154418.8:0
ENSMUST00000148575.2:0
AK132746:0
AK008802:0
AK169106:0
AK168858:0
GeneID:378702
HGNC/MGI_ID:MGI:1337041
UniProt_ID:A2ARQ2 A2ARQ4 D6RCY2 D6RIP7
Nearer transcript ids and distances:
  • NM_011354.3:-148
  • NM_001290837.1:-148
  • NR_110986.1:-148
  • ENSMUST00000139253.8:-151
view more...
Gene_name:small EDRK-rich factor 2
Gene_symbol:Serf2
Gene_synonyms:4F5rel_(4F5_related) m4F5rel
Gene_source:MGI:1337041



TATA-Box annotation


Distance to TSS:189
Nearest PromoterID:NM_001290837.1
Entrez ID:Serf2
Nearest Unigene:NM_011354
Nearest Refseq:
Nearest Ensembl:
Gene Name:small EDRK-rich factor 2
Gene Alias:
Gene Type:
CpG%:0.156627
GC%:0.761905
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.