rfmm_1938.1

Basic information about the TSS

TSS ID:	rfmm_1938.1
Species:	mouse
Chr:	chr1

Start:	54234349
End:	54234370
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2272012,EM10E0935739)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000146850.2:22 AK047602:22
GeneID:	329152
HGNC/MGI_ID:	MGI:2685817
UniProt_ID:	Q8C8B5
Nearer transcript ids and distances:	ENSMUST00000087659.11:156 ENSMUST00000097741.3:156 NM_001001883.3:156 NM_172655.3:156 AK042922:156 BC107219:165 BC134353:166 BC148188:167 view more...

Gene_name:	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
Gene_symbol:	Hecw2
Gene_synonyms:	A730039N16Rik D030049F17Rik Nedl2
Gene_source:	MGI:2685817

TATA-Box annotation

Distance to TSS:	-166
Nearest PromoterID:	NM_001001883.3
Entrez ID:	Hecw2
Nearest Unigene:	NM_172655
Nearest Refseq:
Nearest Ensembl:
Gene Name:	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
Gene Alias:
Gene Type:
CpG%:	0.095238
GC%:	0.590909
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.