rfmm_19856.1

Basic information about the TSS

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TSS ID: rfmm_19856.1 Species: mouse Chr: chr2		Start: 130506486 End: 130506556 Strand: -
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D1727167,EM10E0710219)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: AK011170:0 GeneID: 77006 HGNC/MGI_ID: MGI:1924256 UniProt_ID: Nearer transcript ids and distances: NM_029832.2:-9 BC115616:-9 BC115617:-9 ENSMUST00000089559.11:-23 LF193593:-24 MA429170:-24 ENSMUST00000135072.2:401 view more...

Gene_name: DDRGK domain containing 1 Gene_symbol: Ddrgk1 Gene_synonyms: 1110001I20Rik 2600009E05Rik Gene_source: MGI:1924256

TATA-Box annotation

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Distance to TSS:	28
Nearest PromoterID:	XR_001783204.3
Entrez ID:	Ddrgk1
Nearest Unigene:	XR_004940771
Nearest Refseq:
Nearest Ensembl:
Gene Name:	DDRGK domain containing 1
Gene Alias:
Gene Type:
CpG%:	0.142857
GC%:	0.760563
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.