rfmm_19870.1

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Basic information about the TSS


TSS ID:rfmm_19870.1
Species:mouse
Chr:chr2
Start:130682135
End:130682152
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1727281,EM10E0710265)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK021082:-19
GeneID:77463
HGNC/MGI_ID:MGI:1924713
UniProt_ID:
Nearer transcript ids and distances:
  • LF204170:262
  • MA439747:262
view more...
Gene_name:RIKEN cDNA C030014O09 gene
Gene_symbol:C030014O09Rik
Gene_synonyms:
Gene_source:MGI:1924713



TATA-Box annotation


Distance to TSS:-78
Nearest PromoterID:NM_029432.2
Entrez ID:4930402H24Rik
Nearest Unigene:XM_011239473
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA C030014O09 gene
Gene Alias:
Gene Type:
CpG%:0.176471
GC%:0.833333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.