rfmm_20640.1

Basic information about the TSS

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TSS ID: rfmm_20640.1 Species: mouse Chr: chr2		Start: 146927385 End: 146927403 Strand: -
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2665246,EM10E1099020)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000067020.3:20 GeneID: 228731 HGNC/MGI_ID: MGI:97349 UniProt_ID: Q9EQM3 Nearer transcript ids and distances: BC152743:118 NM_023504.1:120 AF202039:323 view more...

Gene_name: NK2 homeobox 4 Gene_symbol: Nkx2-4 Gene_synonyms: 1700001P03Rik Nkx-2.4 tinman Gene_source: MGI:97349

TATA-Box annotation

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Distance to TSS:	-35
Nearest PromoterID:	XM_006499301.1
Entrez ID:	Nkx2-4
Nearest Unigene:	XM_006499301
Nearest Refseq:
Nearest Ensembl:
Gene Name:	NK2 homeobox 4
Gene Alias:
Gene Type:
CpG%:	0.222222
GC%:	0.842105
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.