rfmm_20711.1

Basic information about the TSS

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TSS ID: rfmm_20711.1 Species: mouse Chr: chr2		Start: 148514555 End: 148514642 Strand: +
Source datasets	DRA000914|PRJDB10397|GSE117655
Protocol	CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2665764,EM10E1099234)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: AK003254:0 BC023672:0 AK168314:0 AF156958:0 GeneID: 56488 HGNC/MGI_ID: MGI:1929619 UniProt_ID: Nearer transcript ids and distances: ENSMUST00000047177.4:-9 NM_019761.6:-20 ENSMUST00000109961.8:-34 view more...

Gene_name: NTF2-related export protein 1 Gene_symbol: Nxt1 Gene_synonyms: 1110001N02Rik Gene_source: MGI:1929619

TATA-Box annotation

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Distance to TSS:	37
Nearest PromoterID:	NM_001110159.1
Entrez ID:	Nxt1
Nearest Unigene:	NM_001110159
Nearest Refseq:
Nearest Ensembl:
Gene Name:	NTF2-related export protein 1
Gene Alias:
Gene Type:
CpG%:	0.137931
GC%:	0.681818
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.