rfmm_21599.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_21599.1
Species:mouse
Chr:chr2
Start:155676766
End:155676781
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1740088,EM10E0715335)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000029143.7:0
ENSMUST00000239423.2:0
BC113190:0
BC113797:0
GeneID:71405
HGNC/MGI_ID:MGI:1918655
UniProt_ID:A0A6Q6PLP7 A2ARK0
Nearer transcript ids and distances:
    Gene_name:family with sequence similarity 83, member C
    Gene_symbol:Fam83c
    Gene_synonyms:5530400B04Rik
    Gene_source:MGI:1918655



    TATA-Box annotation


    Distance to TSS:-1
    Nearest PromoterID:NM_027788.3
    Entrez ID:Fam83c
    Nearest Unigene:NM_027788
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:family with sequence similarity 83, member C
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.625000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.