rfmm_22607.1

Basic information about the TSS

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TSS ID: rfmm_22607.1 Species: mouse Chr: chr2		Start: 164302866 End: 164302938 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D1745671,EM10E0717879)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000164863.2:0 ENSMUST00000072452.11:0 ENSMUST00000138268.8:0 AK007882:0 AK139605:0 AK011753:0 AK003071:0 AK013220:0 AK032073:0 AK075770:0 AK009684:0 GeneID: 66460 HGNC/MGI_ID: MGI:1913710 MGI:5141923 UniProt_ID: D6RE24 E9PXJ7 Q78S06 Q9CYX5 Nearer transcript ids and distances: AK005510:17 AK148305:20 ENSMUST00000142892.8:35 AK005249:51 BC061084:251 ENSMUST00000125086.2:291 BC053943:291 AK032098:291 AK017524:292 view more...

Gene_name: SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae); predicted gene 20458 Gene_symbol: Gm20458 Sys1 Gene_synonyms: 2610042O14Rik Gene_source: MGI:1913710 MGI:5141923

TATA-Box annotation

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Distance to TSS:	11
Nearest PromoterID:	NM_025575.3
Entrez ID:	Sys1
Nearest Unigene:	XR_374501
Nearest Refseq:
Nearest Ensembl:
Gene Name:	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae); predicted gene 20458
Gene Alias:
Gene Type:
CpG%:	0.097222
GC%:	0.684932
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.