rfmm_22811.1

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Basic information about the TSS


TSS ID:rfmm_22811.1
Species:mouse
Chr:chr2
Start:164721656
End:164721724
Strand:-
Source datasetsGSE117655|DRA000914
ProtocoldeepCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2672280,EM10E1102248)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK142117:0
AK015392:0
GeneID:105244413
HGNC/MGI_ID:MGI:1922136
UniProt_ID:
Nearer transcript ids and distances:
  • BC037706:4
Gene_name:RIKEN cDNA 4930445K14 gene
Gene_symbol:4930445K14Rik
Gene_synonyms:
Gene_source:MGI:1922136



TATA-Box annotation


Distance to TSS:-282
Nearest PromoterID:NM_001374128.1
Entrez ID:Pcif1
Nearest Unigene:NM_001374127
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 4930445K14 gene
Gene Alias:
Gene Type:
CpG%:0.132353
GC%:0.768116
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.