rfmm_23165.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_23165.1
Species:mouse
Chr:chr2
Start:167473892
End:167473899
Strand:-
Source datasetsDRA000914
ProtocolCAGE_and_CAGEscan
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2674097,EM10E1103329)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000060645.13:0
ENSMUST00000140216.2:0
GeneID:66589
HGNC/MGI_ID:MGI:1913839
UniProt_ID:B7ZBY6 Q9CZY3
Nearer transcript ids and distances:
  • ENSMUST00000144830.2:-3
  • ENSMUST00000130284.2:5
  • ENSMUST00000151365.8:-8
  • NM_001311131.1:-26
  • NM_023230.2:-26
  • NM_001311146.1:-26
  • AK158230:-26
  • ENSMUST00000109207.10:-116
view more...
Gene_name:ubiquitin-conjugating enzyme E2 variant 1
Gene_symbol:Ube2v1
Gene_synonyms:0610011J09Rik CROC1 D7Bwg1382e
Gene_source:MGI:1913839



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NM_023230.2
Entrez ID:Ube2v1
Nearest Unigene:XM_006500014
Nearest Refseq:
Nearest Ensembl:
Gene Name:ubiquitin-conjugating enzyme E2 variant 1
Gene Alias:
Gene Type:
CpG%:0.142857
GC%:0.625000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.