rfmm_23167.1

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Basic information about the TSS


TSS ID:rfmm_23167.1
TSS ID(Version3):mm_21988.1
Species:mouse
Chr:chr2
Start:167473904
End:167473952
Strand:-
Source datasetsFANTOM5|PRJDB10397|GSE117655|DRA000914
ProtocolCAGE|C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2674097,EM10E1103329)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000151365.8:0
AK158230:0
GeneID:66589
HGNC/MGI_ID:MGI:1913839
UniProt_ID:B7ZBY7
Nearer transcript ids and distances:
  • ENSMUST00000144830.2:2
  • ENSMUST00000140216.2:5
  • ENSMUST00000060645.13:12
  • ENSMUST00000130284.2:17
  • ENSMUST00000109207.10:-63
view more...
Gene_name:ubiquitin-conjugating enzyme E2 variant 1
Gene_symbol:Ube2v1
Gene_synonyms:0610011J09Rik CROC1 D7Bwg1382e
Gene_source:MGI:1913839



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_001311131.1
Entrez ID:Ube2v1
Nearest Unigene:XM_006500014
Nearest Refseq:
Nearest Ensembl:
Gene Name:ubiquitin-conjugating enzyme E2 variant 1
Gene Alias:
Gene Type:
CpG%:0.062500
GC%:0.653061
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.