rfmm_24772.1

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Basic information about the TSS


TSS ID:rfmm_24772.1
Species:mouse
Chr:chr3
Start:19217176
End:19217249
Strand:-
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1761285,EM10E0724961)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000029125.10:0
BC021451:0
BC051067:0
AK144184:0
AK167233:0
AK079299:0
AK009402:0
AK082783:0
AK145993:0
GeneID:74252
HGNC/MGI_ID:MGI:1921502
UniProt_ID:Q9D7A8
Nearer transcript ids and distances:
  • NM_028840.3:-10
  • NM_001357689.1:-10
  • AK208595:89
  • AK213606:89
view more...
Gene_name:armadillo repeat containing 1
Gene_symbol:Armc1
Gene_synonyms:2310016N05Rik 2900046P06Rik 3110009G21Rik Arcp C330014L16Rik
Gene_source:MGI:1921502



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NM_028840.3
Entrez ID:Armc1
Nearest Unigene:NM_001357689
Nearest Refseq:
Nearest Ensembl:
Gene Name:armadillo repeat containing 1
Gene Alias:
Gene Type:
CpG%:0.068493
GC%:0.675676
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.