rfmm_25233.1

Basic information about the TSS

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TSS ID: rfmm_25233.1 Species: mouse Chr: chr3		Start: 31049904 End: 31050017 Strand: +
Source datasets	GSE117655|DRA000914|PRJDB10397
Protocol	deepCAGE|CAGE_and_CAGEscan|C1CAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2684749,EM10E1107486)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: AK144979:0 AK147710:0 AK167411:0 GeneID: 18759 HGNC/MGI_ID: MGI:99260 UniProt_ID: Q3TJJ5 Q3UGW9 Q3UMD5 Nearer transcript ids and distances: ENSMUST00000108249.9:-8 AK220517:-8 LF193880:-9 MA429457:-9 BC021630:43 D28577:108 view more...

Gene_name: protein kinase C, iota Gene_symbol: Prkci Gene_synonyms: 2310021H13Rik PKClambda Pkci Pkcl Prkcl aPKClambda Gene_source: MGI:99260

TATA-Box annotation

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Distance to TSS:	40
Nearest PromoterID:	NM_008857.3
Entrez ID:	Prkci
Nearest Unigene:	XM_006535411
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protein kinase C, iota
Gene Alias:
Gene Type:
CpG%:	0.150442
GC%:	0.771930
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.