rfmm_26056.1

Basic information about the TSS

TSS ID:	rfmm_26056.1
Species:	mouse
Chr:	chr3

Start:	52948939
End:	52949000
Strand:	+

Source datasets

GSE117655|DRA000914

Protocol

deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2689828,EM10E1109288)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000059562.14:0 ENSMUST00000137954.2:0 BC052079:0 AK159549:0 AK159126:0 AK171791:0 AK172390:0 AK172532:0
GeneID:	108927
HGNC/MGI_ID:	MGI:1891214 MGI:1920048
UniProt_ID:	Q3TAK2 Q8BM86
Nearer transcript ids and distances:	ENSMUST00000147139.2:4 BC095934:4 AK034532:131 view more...

Gene_name:	lipoma HMGIC fusion partner; lipoma HMGIC fusion partner-like 1
Gene_symbol:	Lhfp Lhfpl1
Gene_synonyms:	2810489O06Rik Lhfp
Gene_source:	MGI:1891214 MGI:1920048

TATA-Box annotation

Distance to TSS:	1
Nearest PromoterID:	NM_175386.3
Entrez ID:	Lhfp
Nearest Unigene:	NM_175386
Nearest Refseq:
Nearest Ensembl:
Gene Name:	lipoma HMGIC fusion partner; lipoma HMGIC fusion partner-like 1
Gene Alias:
Gene Type:
CpG%:	0.131148
GC%:	0.758065
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.