rfmm_26112.1

Basic information about the TSS

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TSS ID: rfmm_26112.1 Species: mouse Chr: chr3		Start: 54642423 End: 54642499 Strand: -
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS,CTCF-bound (EM10D2690338,EM10E1109476)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000150923.8:0 ENSMUST00000153224.2:0 ENSMUST00000135935.2:0 ENSMUST00000198780.2:0 AK009584:0 BC004769:0 AJ505005:0 AK165758:0 GeneID: 69639 HGNC/MGI_ID: MGI:1916889 UniProt_ID: D3YYN3 Q546F8 Q9D753 Nearer transcript ids and distances: ENSMUST00000134892.8:200 NM_001163570.1:-286 NM_027148.3:-286 AK220227:-286 ENSMUST00000127112.8:-289 AK047257:-289 ENSMUST00000029316.16:-315 BC059089:-315 view more...

Gene_name: exosome component 8 Gene_symbol: Exosc8 Gene_synonyms: 2310032N20Rik Gene_source: MGI:1916889

TATA-Box annotation

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Distance to TSS:	324
Nearest PromoterID:	NM_027148.3
Entrez ID:	Exosc8
Nearest Unigene:	NM_001163570
Nearest Refseq:
Nearest Ensembl:
Gene Name:	exosome component 8
Gene Alias:
Gene Type:
CpG%:	0.131579
GC%:	0.714286
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.