rfmm_26614.1

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Basic information about the TSS


TSS ID:rfmm_26614.1
Species:mouse
Chr:chr3
Start:65566641
End:65566663
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2692956,EM10E1110423)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000185035.3:46
GeneID:102465905
HGNC/MGI_ID:MGI:5531019
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:microRNA 8120
    Gene_symbol:Mir8120
    Gene_synonyms:mmu-mir-8120
    Gene_source:MGI:5531019



    TATA-Box annotation


    Distance to TSS:-57
    Nearest PromoterID:NR_106200.1
    Entrez ID:Mir8120
    Nearest Unigene:NR_106200
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:microRNA 8120
    Gene Alias:
    Gene Type:
    CpG%:0.045455
    GC%:0.695652
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.