rfmm_27972.1

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Basic information about the TSS


TSS ID:rfmm_27972.1
Species:mouse
Chr:chr3
Start:89090707
End:89090717
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000127982.8:170
BC085505:170
GeneID:68521
HGNC/MGI_ID:MGI:1915771
UniProt_ID:D6RDQ0
Nearer transcript ids and distances:
  • BC088990:-175
  • ENSMUST00000147696.8:-196
  • BC068123:-196
  • ENSMUST00000041913.13:-197
  • ENSMUST00000117278.8:223
  • ENSMUST00000119707.2:231
  • ENSMUST00000140473.2:-257
  • NM_001355765.1:-257
  • NM_001014995.2:-257
  • NM_001355760.1:-257
view more...
Gene_name:endosomal transmembrane epsin interactor 3
Gene_symbol:Entrep3
Gene_synonyms:1110013L07Rik Fam189b
Gene_source:MGI:1915771



TATA-Box annotation


Distance to TSS:262
Nearest PromoterID:NM_001355760.1
Entrez ID:Fam189b
Nearest Unigene:XM_006501977
Nearest Refseq:
Nearest Ensembl:
Gene Name:endosomal transmembrane epsin interactor 3
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.