rfmm_27977.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_27977.1
Species:mouse
Chr:chr3
Start:89094671
End:89094682
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS,CTCF-bound (EM10D1790772,EM10E0735461)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000136209.2:1
GeneID:68521
HGNC/MGI_ID:MGI:1915771
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:endosomal transmembrane epsin interactor 3
    Gene_symbol:Entrep3
    Gene_synonyms:1110013L07Rik Fam189b
    Gene_source:MGI:1915771



    TATA-Box annotation


    Distance to TSS:-2955
    Nearest PromoterID:XR_003954660.2
    Entrez ID:Gm16069
    Nearest Unigene:XR_003954659
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:endosomal transmembrane epsin interactor 3
    Gene Alias:
    Gene Type:
    CpG%:0.090909
    GC%:0.583333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.