rfmm_28080.1

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Basic information about the TSS


TSS ID:rfmm_28080.1
Species:mouse
Chr:chr3
Start:89319148
End:89319201
Strand:-
Source datasetsFANTOM5|EPD|DRA000914
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1791040,EM10E0735668)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000050398.11:0
ENSMUST00000129308.9:0
ENSMUST00000107426.8:0
ENSMUST00000162701.2:0
AK161929:0
BC046769:0
GeneID:319945
HGNC/MGI_ID:MGI:2443030
UniProt_ID:E0CZ66 Q8R123
Nearer transcript ids and distances:
  • BC025817:25
  • LF268170:39
  • MA503747:39
  • ENSMUST00000107429.10:60
view more...
Gene_name:flavin adenine dinucleotide synthetase 1
Gene_symbol:Flad1
Gene_synonyms:A930017E24Rik Pp591
Gene_source:MGI:2443030



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NM_001362376.1
Entrez ID:Flad1
Nearest Unigene:NM_001362376
Nearest Refseq:
Nearest Ensembl:
Gene Name:flavin adenine dinucleotide synthetase 1
Gene Alias:
Gene Type:
CpG%:0.056604
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.