rfmm_28161.1

Basic information about the TSS

TSS ID:	rfmm_28161.1
Species:	mouse
Chr:	chr3

Start:	89905964
End:	89906011
Strand:	-

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D1791560,EM10E0735952)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000079724.9:0 ENSMUST00000197767.5:0 ENSMUST00000197786.5:0 ENSMUST00000199014.5:0 ENSMUST00000199163.2:0 AK135138:0 AF023482:0 AF023483:0 AK010633:0 AK088746:0
GeneID:	23897
HGNC/MGI_ID:	MGI:1346319
UniProt_ID:	A0A0G2JDP0 A0A0G2JE46 A0A0G2JGR0 B9EJR4 Q3UXX9
Nearer transcript ids and distances:	BC147481:10 NM_011826.4:-12 NM_001282032.1:-12 ENSMUST00000197725.5:37 ENSMUST00000199469.2:-76 LF194015:-77 MA429592:-77 AF465243:77 ENSMUST00000198782.2:268 ENSMUST00000199740.2:295 LF268226:336 MA503803:336 LF268225:427 MA503802:427 view more...

Gene_name:	HCLS1 associated X-1
Gene_symbol:	Hax1
Gene_synonyms:	HAX-1 HS1-associated_protein_X-1 Hs1bp1 Silg111 mHAX-1s
Gene_source:	MGI:1346319

TATA-Box annotation

Distance to TSS:	21
Nearest PromoterID:	XM_006501446.4
Entrez ID:	Hax1
Nearest Unigene:	NM_001282032
Nearest Refseq:
Nearest Ensembl:
Gene Name:	HCLS1 associated X-1
Gene Alias:
Gene Type:
CpG%:	0.085106
GC%:	0.583333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.