rfmm_28757.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_28757.1
Species:mouse
Chr:chr3
Start:94566145
End:94566145
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2700726,EM10E1113587)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK171705:2
GeneID:22156
HGNC/MGI_ID:MGI:109572
UniProt_ID:Q3TAP8
Nearer transcript ids and distances:
  • AF047704:32
  • ENSMUST00000006123.11:-33
  • ENSMUST00000196733.5:-34
  • NM_011656.3:-34
  • NM_001293728.1:-34
  • ENSMUST00000196496.2:35
  • AK132488:35
  • ENSMUST00000196655.5:38
  • ENSMUST00000200407.2:38
  • BC019213:46
  • AF002860:72
view more...
Gene_name:tuftelin 1
Gene_symbol:Tuft1
Gene_synonyms:
Gene_source:MGI:109572



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NM_011656.3
Entrez ID:Tuft1
Nearest Unigene:NM_001293728
Nearest Refseq:
Nearest Ensembl:
Gene Name:tuftelin 1
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.