rfmm_29303.1

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Basic information about the TSS


TSS ID:rfmm_29303.1
Species:mouse
Chr:chr3
Start:96615841
End:96615869
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2701957,EM10E1114309)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000200387.2:0
ENSMUST00000029742.9:0
AK134929:0
AK031193:0
AK141256:0
GeneID:78373
HGNC/MGI_ID:MGI:1925623
UniProt_ID:A0A0G2JES0 Q9CWD3
Nearer transcript ids and distances:
  • NM_001162925.1:-7
  • NM_030094.1:-7
  • ENSMUST00000171249.6:-9
  • AK019109:-9
  • BC115559:-9
view more...
Gene_name:nudix hydrolase 17
Gene_symbol:Nudt17
Gene_synonyms:2410015C20Rik nudix_(nucleoside_diphosphate_linked_moiety_X)-type_motif_17
Gene_source:MGI:1925623



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:XM_030252902.2
Entrez ID:Nudt17
Nearest Unigene:XM_030252901
Nearest Refseq:
Nearest Ensembl:
Gene Name:nudix hydrolase 17
Gene Alias:
Gene Type:
CpG%:0.071429
GC%:0.689655
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.