rfmm_29399.1

Basic information about the TSS

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TSS ID: rfmm_29399.1 Species: mouse Chr: chr3		Start: 97808516 End: 97808566 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D1795574,EM10E0738059)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000130778.2:0 ENSMUST00000130620.2:0 ENSMUST00000122288.2:0 AK010363:0 AK034973:0 AK017237:0 AK134215:0 AK088514:0 AK037918:0 AK089928:0 GeneID: 20333 HGNC/MGI_ID: MGI:1338759 UniProt_ID: A0A0G2JF08 D6RES2 E9Q6R3 Q3UZ06 Nearer transcript ids and distances: ENSMUST00000029476.9:-10 LF194100:-11 MA429677:-11 BC009024:15 LF268739:19 MA504316:19 AK089341:23 U91538:31 LF268740:118 MA504317:118 view more...

Gene_name: SEC22 homolog B, vesicle trafficking protein Gene_symbol: Sec22b Gene_synonyms: 4930564D15Rik ERS-24 Sec22l1 Gene_source: MGI:1338759

TATA-Box annotation

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Distance to TSS:	-2
Nearest PromoterID:	NM_011342.4
Entrez ID:	Sec22b
Nearest Unigene:	NM_011342
Nearest Refseq:
Nearest Ensembl:
Gene Name:	SEC22 homolog B, vesicle trafficking protein
Gene Alias:
Gene Type:
CpG%:	0.120000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.