rfmm_294.1

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Basic information about the TSS


TSS ID:rfmm_294.1
Species:mouse
Chr:chr1
Start:12762630
End:12762643
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1039029,EM10E0431952)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001198566.1:11
NM_001198565.1:11
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK078756:23
  • ENSMUST00000180062.8:-83
  • AK129278:110
  • ENSMUST00000186051.7:113
  • AK045002:113
  • AK028285:113
  • ENSMUST00000177608.8:-129
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-18
Nearest PromoterID:NM_001198566.1
Entrez ID:Sulf1
Nearest Unigene:NM_172294
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.076923
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):