rfmm_32282.1

Basic information about the TSS

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TSS ID: rfmm_32282.1 Species: mouse Chr: chr3		Start: 142470978 End: 142470993 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2715410,EM10E1119583)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000196311.2:0 AK146223:0 AK143935:0 AK133097:0 AK145403:0 AK131856:0 AK133825:0 AK146666:0 AK146910:0 AK151577:0 GeneID: 229906 HGNC/MGI_ID: MGI:2385191 UniProt_ID: Q3UNY0 Q3UZJ3 Nearer transcript ids and distances: NM_145546.1:15 BC016637:15 ENSMUST00000029938.10:-172 view more...

Gene_name: general transcription factor IIB Gene_symbol: Gtf2b Gene_synonyms: Gene_source: MGI:2385191

TATA-Box annotation

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Distance to TSS:	-23
Nearest PromoterID:	NM_145546.1
Entrez ID:	Gtf2b
Nearest Unigene:	NM_145546
Nearest Refseq:
Nearest Ensembl:
Gene Name:	general transcription factor IIB
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.625000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.