rfmm_33272.1

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Basic information about the TSS


TSS ID:rfmm_33272.1
Species:mouse
Chr:chr4
Start:9770626
End:9770689
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2721680,EM10E1121585)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000146481.8:0
ENSMUST00000144703.2:0
AK019984:0
GeneID:320152
HGNC/MGI_ID:MGI:2443490
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000124122.8:-41
  • ENSMUST00000138390.8:-41
  • NR_030693.1:-41
  • KY467963:-41
  • AK035353:-41
  • AK076677:52
  • ENSMUST00000154082.2:108
view more...
Gene_name:RIKEN cDNA 4930412C18 gene
Gene_symbol:4930412C18Rik
Gene_synonyms:
Gene_source:MGI:2443490



TATA-Box annotation


Distance to TSS:72
Nearest PromoterID:NR_030693.1
Entrez ID:4930412C18Rik
Nearest Unigene:NR_030693
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 4930412C18 gene
Gene Alias:
Gene Type:
CpG%:0.095238
GC%:0.640625
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.