rfmm_34326.1
Basic information about the TSS
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| Source datasets | DRA000914 | |||||||||||||
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| Protocol | CAGE_and_CAGEscan | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | - |
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| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 107 |
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| Nearest PromoterID: | NM_009503.4 |
| Entrez ID: | Vcp |
| Nearest Unigene: | NM_009503 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | valosin containing protein |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.200000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK146109:-1 AK169140:-4 BC043053:-9 ENSMUST00000148182.2:-31 AK028264:-32 AK159475:-32 AK159177:-33 AK153012:-34 AK167794:-50 BC049114:-53 AK030751:62 AK160889:75 AK153249:-76 AK159509:-77 ENSMUST00000030164.8:-105 NM_009503.4:-105 AK194951:203 AK201680:203 AK202683:203 AK190461:203 AK190822:203 AK199787:203" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.