rfmm_34611.1

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Basic information about the TSS


TSS ID:rfmm_34611.1
TSS ID(Version3):mm_35736.1
Species:mouse
Chr:chr4
Start:45108001
End:45108132
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2728691,EM10E1123971)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000107810.3:0
ENSMUST00000107809.9:0
ENSMUST00000107808.3:0
ENSMUST00000107807.2:0
AK003822:0
GeneID:68512
HGNC/MGI_ID:MGI:1915762
UniProt_ID:B1AXP6
Nearer transcript ids and distances:
    Gene_name:translocase of outer mitochondrial membrane 5
    Gene_symbol:Tomm5
    Gene_synonyms:1110019J04Rik
    Gene_source:MGI:1915762



    TATA-Box annotation


    Distance to TSS:47
    Nearest PromoterID:NM_001099675.1
    Entrez ID:Tomm5
    Nearest Unigene:NM_001134646
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:translocase of outer mitochondrial membrane 5
    Gene Alias:
    Gene Type:
    CpG%:0.068702
    GC%:0.643939
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.