rfmm_35594.1

Basic information about the TSS

TSS ID:	rfmm_35594.1
Species:	mouse
Chr:	chr4

Start:	62327008
End:	62327102
Strand:	+

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2734081,EM10E1126162)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000084524.4:0 AK166912:0 AK005464:0 AK167216:0 AK090114:0 AK169532:0 AK085174:0 BC106089:0 BC125529:0 BC125531:0 AK089838:0
GeneID:	70052
HGNC/MGI_ID:	MGI:1917302
UniProt_ID:	Q059T9 Q8BTJ0
Nearer transcript ids and distances:

Gene_name:	pre-mRNA processing factor 4
Gene_symbol:	Prpf4
Gene_synonyms:	1600015H11Rik
Gene_source:	MGI:1917302

TATA-Box annotation

Distance to TSS:	-32
Nearest PromoterID:	XM_030253770.2
Entrez ID:	Prpf4
Nearest Unigene:	XM_006538249
Nearest Refseq:
Nearest Ensembl:
Gene Name:	pre-mRNA processing factor 4
Gene Alias:
Gene Type:
CpG%:	0.127660
GC%:	0.610526
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.