rfmm_37269.1

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Basic information about the TSS


TSS ID:rfmm_37269.1
Species:mouse
Chr:chr4
Start:108240653
End:108240653
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2745392,EM10E1130126)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000053157.7:107
GeneID:545667
HGNC/MGI_ID:MGI:3651644
UniProt_ID:A2A9G7
Nearer transcript ids and distances:
  • NM_001099303.2:-199
Gene_name:shisa like 2A
Gene_symbol:Shisal2a
Gene_synonyms:Fam159a OTTMUSG00000008243
Gene_source:MGI:3651644



TATA-Box annotation


Distance to TSS:16
Nearest PromoterID:XR_004942157.1
Entrez ID:Gm32297
Nearest Unigene:XR_004942160
Nearest Refseq:
Nearest Ensembl:
Gene Name:shisa like 2A
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.