rfmm_37817.1

Basic information about the TSS

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TSS ID: rfmm_37817.1 Species: mouse Chr: chr4		Start: 116953247 End: 116953280 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2747392,EM10E1130908)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000030443.12:0 GeneID: 19207 HGNC/MGI_ID: MGI:1095405 UniProt_ID: O35595 Nearer transcript ids and distances: LF194556:-6 MA430133:-6 ENSMUST00000144620.8:13 BC058397:13 BC166018:268 LF204823:272 MA440400:272 AB010833:273 BC128335:273 view more...

Gene_name: patched 2 Gene_symbol: Ptch2 Gene_synonyms: ptc2 Gene_source: MGI:1095405

TATA-Box annotation

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Distance to TSS:	10
Nearest PromoterID:	NM_001312903.1
Entrez ID:	Ptch2
Nearest Unigene:	NM_008958
Nearest Refseq:
Nearest Ensembl:
Gene Name:	patched 2
Gene Alias:
Gene Type:
CpG%:	0.060606
GC%:	0.558824
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.