rfmm_38.1

Basic information about the TSS

TSS ID:	rfmm_38.1
TSS ID(Version3):	mm_8.1
Species:	mouse
Chr:	chr1

Start:	4878071
End:	4878151
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|PRJDB10397|GSE117655

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2262732,EM10E0932282)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000155020.2:0 ENSMUST00000119612.9:0 ENSMUST00000137887.8:0 ENSMUST00000115529.8:0 BC052848:0 AK167231:0 AK146874:0 AK002674:0 BC013536:0 CT010201:0 U89352:0 AK050549:0
GeneID:	18777
HGNC/MGI_ID:	MGI:1344588 MGI:5611216
UniProt_ID:	D3Z111 D3Z269 J3QM41 J3QQ63 Q4FK51
Nearer transcript ids and distances:	ENSMUST00000150971.8:-18 ENSMUST00000027036.11:-25 NM_001355712.1:-25 NM_008866.3:-25 ENSMUST00000134384.8:-60 AK016021:-60 ENSMUST00000131119.2:309 view more...

Gene_name:	lysophospholipase 1; predicted gene, 37988
Gene_symbol:	Gm37988 Lypla1
Gene_synonyms:	Gm39587 Pla1a
Gene_source:	MGI:1344588 MGI:5611216

TATA-Box annotation

Distance to TSS:	65
Nearest PromoterID:	NM_008866.3
Entrez ID:	Lypla1
Nearest Unigene:	NM_008866
Nearest Refseq:
Nearest Ensembl:
Gene Name:	lysophospholipase 1; predicted gene, 37988
Gene Alias:
Gene Type:
CpG%:	0.112500
GC%:	0.679012
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.