rfmm_38924.1

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Basic information about the TSS


TSS ID:rfmm_38924.1
Species:mouse
Chr:chr4
Start:128951751
End:128951781
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2752324,EM10E1133198)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000149472.3:0
AK005980:0
AK019743:0
GeneID:67349
HGNC/MGI_ID:MGI:1914599
UniProt_ID:
Nearer transcript ids and distances:
  • AK007024:9
Gene_name:RIKEN cDNA 1700086P04 gene
Gene_symbol:1700086P04Rik
Gene_synonyms:
Gene_source:MGI:1914599



TATA-Box annotation


Distance to TSS:94
Nearest PromoterID:XR_003955283.2
Entrez ID:1700086P04Rik
Nearest Unigene:XR_003955282
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700086P04 gene
Gene Alias:
Gene Type:
CpG%:0.133333
GC%:0.774194
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.