rfmm_39201.1

Basic information about the TSS

TSS ID:	rfmm_39201.1
Species:	mouse
Chr:	chr4

Start:	130253709
End:	130253759
Strand:	-

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2753154,EM10E1133693)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000134159.3:0 ENSMUST00000167964.3:0 AK168912:0 AY253297:0 AK012953:0 BC049231:0 AK152289:0 AK161588:0 AK050342:0
GeneID:	619605
HGNC/MGI_ID:	MGI:1919955
UniProt_ID:	Q3TG23 Q3TT47
Nearer transcript ids and distances:	AJ272345:17 NM_153160.5:-26 NM_001355399.1:-26 NM_001355398.1:-26 NR_149716.1:-26 NR_149717.1:-26 LF194647:-27 MA430224:-27 LF274861:111 MA510438:111 LF274860:238 MA510437:238 LF274859:369 MA510436:369 view more...

Gene_name:	zinc finger, CCHC domain containing 17
Gene_symbol:	Zcchc17
Gene_synonyms:	2810055E05Rik HSPC251 Ps1d
Gene_source:	MGI:1919955

TATA-Box annotation

Distance to TSS:	26
Nearest PromoterID:	XM_030253690.2
Entrez ID:	Zcchc17
Nearest Unigene:	NM_001355400
Nearest Refseq:
Nearest Ensembl:
Gene Name:	zinc finger, CCHC domain containing 17
Gene Alias:
Gene Type:
CpG%:	0.140000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.