rfmm_39553.1

Basic information about the TSS

TSS ID:	rfmm_39553.1
Species:	mouse
Chr:	chr4

Start:	132611718
End:	132611812
Strand:	-

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2754223,EM10E1134274)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK076390:0 AK167804:0 AK077678:0 AK146544:0 AK168753:0 BC010669:0 AK078948:0 AK146735:0 AK170203:0 AK132618:0
GeneID:	100226
HGNC/MGI_ID:	MGI:1931027
UniProt_ID:	Q3TDG9 Q3TIL5
Nearer transcript ids and distances:	AB019211:6 ENSMUST00000030698.5:-8 LF194664:-9 MA430241:-9 AK167087:36 LF275030:368 MA510607:368 view more...

Gene_name:	syntaxin 12
Gene_symbol:	Stx12
Gene_synonyms:	Stx13 syntaxin_13
Gene_source:	MGI:1931027

TATA-Box annotation

Distance to TSS:	4
Nearest PromoterID:	NM_133887.4
Entrez ID:	Stx12
Nearest Unigene:	NM_133887
Nearest Refseq:
Nearest Ensembl:
Gene Name:	syntaxin 12
Gene Alias:
Gene Type:
CpG%:	0.085106
GC%:	0.684211
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.