rfmm_40179.1

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Basic information about the TSS


TSS ID:rfmm_40179.1
Species:mouse
Chr:chr4
Start:136151886
End:136151901
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:DNase-H3K4me3 (EM10D1885017,EM10E0773310)
Category:DNase-H3K4me3

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000133818.2:22
GeneID:15552
HGNC/MGI_ID:MGI:96276
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:5-hydroxytryptamine (serotonin) receptor 1D
    Gene_symbol:Htr1d
    Gene_synonyms:Gpcr14 Htr1db
    Gene_source:MGI:96276



    TATA-Box annotation


    Distance to TSS:-30
    Nearest PromoterID:NM_001285484.1
    Entrez ID:Htr1d
    Nearest Unigene:XM_017319986
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:5-hydroxytryptamine (serotonin) receptor 1D
    Gene Alias:
    Gene Type:
    CpG%:0.066667
    GC%:0.750000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.