rfmm_4084.1

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Basic information about the TSS


TSS ID:rfmm_4084.1
Species:mouse
Chr:chr1
Start:85177352
End:85177353
Strand:+
Source datasetsDRA000914
ProtocolCAGE_and_CAGEscan
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000160058.8:-18
ENSMUST00000161424.5:-18
GeneID:665378
HGNC/MGI_ID:MGI:3644536 MGI:6388829
UniProt_ID:A0A668KL92
Nearer transcript ids and distances:
  • NM_001081746.1:-20
  • AK156961:-22
  • ENSMUST00000239303.2:65
  • ENSMUST00000113402.4:76
  • BC059276:76
view more...
Gene_name:predicted gene, 52950; predicted pseudogene 7609
Gene_symbol:Gm52950 Gm7609
Gene_synonyms:
Gene_source:MGI:3644536 MGI:6388829



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NM_001081746.1
Entrez ID:Gm7609
Nearest Unigene:XM_006496523
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene, 52950; predicted pseudogene 7609
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.